Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm10156-201ENSMUST00000122364 462 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Mir7070-201ENSMUST00000183657 86 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm29199-201ENSMUST00000187766 775 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm44397-201ENSMUST00000195950 113 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm43818-201ENSMUST00000200605 466 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm29608-201ENSMUST00000190444 463 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.94■□□□□ 0.14
Col11a1Q61245 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a1Q61245 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col11a1Q61245 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.93■□□□□ 0.14
Col11a1Q61245 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col11a1Q61245 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col11a1Q61245 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Gm15371-201ENSMUST00000117057 784 ntBASIC15.93■□□□□ 0.14
Col11a1Q61245 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.93■□□□□ 0.14
Col11a1Q61245 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.93■□□□□ 0.14
Col11a1Q61245 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.93■□□□□ 0.14
Col11a1Q61245 Gm24420-201ENSMUST00000176676 59 ntBASIC15.93■□□□□ 0.14
Col11a1Q61245 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.93■□□□□ 0.14
Col11a1Q61245 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.93■□□□□ 0.14
Col11a1Q61245 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a1Q61245 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.92■□□□□ 0.14
Col11a1Q61245 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.92■□□□□ 0.14
Col11a1Q61245 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.92■□□□□ 0.14
Col11a1Q61245 Gm3786-201ENSMUST00000202659 378 ntBASIC15.92■□□□□ 0.14
Col11a1Q61245 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.92■□□□□ 0.14
Col11a1Q61245 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.92■□□□□ 0.14
Col11a1Q61245 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col11a1Q61245 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col11a1Q61245 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.92■□□□□ 0.14
Col11a1Q61245 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a1Q61245 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 Gm15808-201ENSMUST00000119046 604 ntBASIC15.91■□□□□ 0.14
Col11a1Q61245 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.91■□□□□ 0.14
Col11a1Q61245 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.91■□□□□ 0.14
Col11a1Q61245 Olfr284-202ENSMUST00000206647 966 ntBASIC15.91■□□□□ 0.14
Col11a1Q61245 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.91■□□□□ 0.14
Col11a1Q61245 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.91■□□□□ 0.14
Col11a1Q61245 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col11a1Q61245 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Col11a1Q61245 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a1Q61245 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col11a1Q61245 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms