Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.06□□□□□ -0.16
Col12a1Q60847 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.06□□□□□ -0.16
Col12a1Q60847 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.06□□□□□ -0.16
Col12a1Q60847 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.06□□□□□ -0.16
Col12a1Q60847 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.06□□□□□ -0.16
Col12a1Q60847 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Gm8749-201ENSMUST00000117737 331 ntBASIC14.06□□□□□ -0.16
Col12a1Q60847 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Col12a1Q60847 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col12a1Q60847 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm8810-201ENSMUST00000172895 754 ntBASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm21470-201ENSMUST00000187680 696 ntBASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm6621-201ENSMUST00000193251 772 ntBASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.05□□□□□ -0.16
Col12a1Q60847 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm2383-201ENSMUST00000181461 807 ntBASIC14.05□□□□□ -0.16
Col12a1Q60847 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.05□□□□□ -0.16
Col12a1Q60847 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col12a1Q60847 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.05□□□□□ -0.16
Col12a1Q60847 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm5523-201ENSMUST00000180415 997 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm13216-201ENSMUST00000117145 591 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.04□□□□□ -0.16
Col12a1Q60847 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm24255-201ENSMUST00000104481 128 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms