Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim58Q5NCC9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim58Q5NCC9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim58Q5NCC9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Gm11543-201ENSMUST00000120758 370 ntBASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim58Q5NCC9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.32■□□□□ 0.52
Trim58Q5NCC9 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim58Q5NCC9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.31■□□□□ 0.52
Trim58Q5NCC9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.31■□□□□ 0.52
Trim58Q5NCC9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim58Q5NCC9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms