Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.36□□□□□ -0.11
Scn2bQ56A07 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Gm8000-201ENSMUST00000188378 592 ntBASIC14.36□□□□□ -0.11
Scn2bQ56A07 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn2bQ56A07 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.35□□□□□ -0.11
Scn2bQ56A07 Gm9727-201ENSMUST00000161387 555 ntBASIC14.35□□□□□ -0.11
Scn2bQ56A07 Gm27300-201ENSMUST00000184085 97 ntBASIC14.35□□□□□ -0.11
Scn2bQ56A07 Gm27525-201ENSMUST00000184465 107 ntBASIC14.35□□□□□ -0.11
Scn2bQ56A07 Gm27335-201ENSMUST00000184758 97 ntBASIC14.35□□□□□ -0.11
Scn2bQ56A07 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.35□□□□□ -0.11
Scn2bQ56A07 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn2bQ56A07 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn2bQ56A07 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Scn2bQ56A07 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Scn2bQ56A07 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn2bQ56A07 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn2bQ56A07 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn2bQ56A07 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn2bQ56A07 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn2bQ56A07 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms