Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 BC001981-202ENSMUST00000191393 1545 ntBASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Gm4875-201ENSMUST00000118257 786 ntBASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rc3h1Q4VGL6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Syt7-204ENSMUST00000223586 1344 ntBASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Gm15653-201ENSMUST00000119247 907 ntBASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Gm16215-201ENSMUST00000161990 637 ntBASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rc3h1Q4VGL6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gm5866-201ENSMUST00000177881 973 ntBASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gm27838-201ENSMUST00000184829 128 ntBASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gm29667-201ENSMUST00000190817 490 ntBASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rc3h1Q4VGL6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Gm15321-201ENSMUST00000121290 288 ntBASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms