Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Gm2423-201ENSMUST00000074863 733 ntBASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Syt7-204ENSMUST00000223586 1344 ntBASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38aQ4FK66 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Gm7730-201ENSMUST00000212486 454 ntBASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38aQ4FK66 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Carlr-201ENSMUST00000181515 2574 ntBASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Gm3436-201ENSMUST00000179930 840 ntBASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf38aQ4FK66 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.9■□□□□ 0.3
Prpf38aQ4FK66 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms