Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Gm13884-201ENSMUST00000118103 829 ntBASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Gm6198-201ENSMUST00000191337 2929 ntBASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc27Q3V036 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Mypopos-202ENSMUST00000205975 2321 ntBASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Gm38094-201ENSMUST00000195864 2978 ntBASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc27Q3V036 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Gm4899-201ENSMUST00000178708 719 ntBASIC18.49■□□□□ 0.55
Ccdc27Q3V036 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc27Q3V036 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 AC164107.1-201ENSMUST00000227730 2161 ntBASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc27Q3V036 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms