Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Gm44492-201ENSMUST00000197012 141 ntBASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf2Q3UAW9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm14042-201ENSMUST00000120139 833 ntBASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm17271-201ENSMUST00000165535 355 ntBASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Mir3113-201ENSMUST00000175478 76 ntBASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm45098-201ENSMUST00000207179 657 ntBASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Brf2Q3UAW9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.65□□□□□ -0.22
Brf2Q3UAW9 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms