Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Olfr286-202ENSMUST00000205305 969 ntBASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC7.53□□□□□ -1.2
Ush2AQ2QI47 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Gm13611-201ENSMUST00000118269 318 ntBASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Gm14730-201ENSMUST00000122378 1045 ntBASIC7.52□□□□□ -1.2
Ush2AQ2QI47 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Ush2AQ2QI47 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm11470-201ENSMUST00000118868 1475 ntBASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 AC123645.1-201ENSMUST00000228469 605 ntBASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 CT025602.2-201ENSMUST00000226553 772 ntBASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ush2AQ2QI47 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm13665-201ENSMUST00000120830 528 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Ighv1-86-201ENSMUST00000200562 353 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm25214-201ENSMUST00000104573 129 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm27772-201ENSMUST00000184900 187 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm28324-201ENSMUST00000187913 264 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 AC159819.2-201ENSMUST00000216151 342 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms