Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ebf1Q07802 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.71□□□□□ -0.06
Ebf1Q07802 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ebf1Q07802 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ebf1Q07802 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.7□□□□□ -0.06
Ebf1Q07802 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.7□□□□□ -0.06
Ebf1Q07802 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Gm5566-201ENSMUST00000116118 459 ntBASIC14.7□□□□□ -0.06
Ebf1Q07802 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Ebf1Q07802 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ebf1Q07802 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ebf1Q07802 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Gm9794-201ENSMUST00000202370 423 ntBASIC14.69□□□□□ -0.06
Ebf1Q07802 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.69□□□□□ -0.06
Ebf1Q07802 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf1Q07802 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf1Q07802 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ebf1Q07802 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Ebf1Q07802 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ebf1Q07802 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Gm24543-201ENSMUST00000103867 82 ntBASIC14.68□□□□□ -0.06
Ebf1Q07802 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.68□□□□□ -0.06
Ebf1Q07802 Gm9719-201ENSMUST00000162765 543 ntBASIC14.68□□□□□ -0.06
Ebf1Q07802 Gm24694-201ENSMUST00000180054 110 ntBASIC14.68□□□□□ -0.06
Ebf1Q07802 Gm27663-201ENSMUST00000184839 110 ntBASIC14.68□□□□□ -0.06
Ebf1Q07802 Gm7653-201ENSMUST00000214567 508 ntBASIC14.68□□□□□ -0.06
Ebf1Q07802 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms