Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.95□□□□□ -0.34
SgcbP82349 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.95□□□□□ -0.34
SgcbP82349 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
SgcbP82349 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SgcbP82349 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.94□□□□□ -0.34
SgcbP82349 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.94□□□□□ -0.34
SgcbP82349 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.94□□□□□ -0.34
SgcbP82349 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.94□□□□□ -0.34
SgcbP82349 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.94□□□□□ -0.34
SgcbP82349 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SgcbP82349 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SgcbP82349 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.94□□□□□ -0.34
SgcbP82349 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.94□□□□□ -0.34
SgcbP82349 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.94□□□□□ -0.34
SgcbP82349 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.94□□□□□ -0.34
SgcbP82349 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SgcbP82349 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcbP82349 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.93□□□□□ -0.34
SgcbP82349 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SgcbP82349 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SgcbP82349 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
SgcbP82349 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SgcbP82349 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.93□□□□□ -0.34
SgcbP82349 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.93□□□□□ -0.34
SgcbP82349 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.93□□□□□ -0.34
SgcbP82349 Gm27430-201ENSMUST00000184585 107 ntBASIC12.93□□□□□ -0.34
SgcbP82349 Gm44333-201ENSMUST00000197168 107 ntBASIC12.93□□□□□ -0.34
SgcbP82349 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.93□□□□□ -0.34
SgcbP82349 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SgcbP82349 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SgcbP82349 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcbP82349 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms