Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.34□□□□□ -0.11
Shox2P70390 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.34□□□□□ -0.11
Shox2P70390 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.34□□□□□ -0.11
Shox2P70390 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.34□□□□□ -0.11
Shox2P70390 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Shox2P70390 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shox2P70390 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.34□□□□□ -0.11
Shox2P70390 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shox2P70390 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shox2P70390 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Shox2P70390 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shox2P70390 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gm13464-201ENSMUST00000119418 935 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gm9013-201ENSMUST00000132939 882 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Gm25745-201ENSMUST00000174945 133 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shox2P70390 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.33□□□□□ -0.12
Shox2P70390 Gm8520-201ENSMUST00000186517 868 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Gm37055-201ENSMUST00000191866 133 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Gm43799-201ENSMUST00000201845 579 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.33□□□□□ -0.12
Shox2P70390 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shox2P70390 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shox2P70390 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Shox2P70390 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.33□□□□□ -0.12
Shox2P70390 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shox2P70390 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shox2P70390 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.32□□□□□ -0.12
Shox2P70390 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.32□□□□□ -0.12
Shox2P70390 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shox2P70390 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.32□□□□□ -0.12
Shox2P70390 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.32□□□□□ -0.12
Shox2P70390 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.32□□□□□ -0.12
Shox2P70390 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Shox2P70390 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.32□□□□□ -0.12
Shox2P70390 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms