Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Gm18246-201ENSMUST00000221023 728 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.4□□□□□ -0.74
Ube2d3P61079 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube2d3P61079 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube2d3P61079 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.4□□□□□ -0.74
Ube2d3P61079 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.4□□□□□ -0.74
Ube2d3P61079 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube2d3P61079 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Ube2d3P61079 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.4□□□□□ -0.74
Ube2d3P61079 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.4□□□□□ -0.74
Ube2d3P61079 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube2d3P61079 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube2d3P61079 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Ube2d3P61079 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube2d3P61079 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube2d3P61079 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Ube2d3P61079 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube2d3P61079 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube2d3P61079 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ube2d3P61079 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Ube2d3P61079 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
Ube2d3P61079 AV026068-213ENSMUST00000223675 1171 ntBASIC10.39□□□□□ -0.75
Ube2d3P61079 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms