Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Sssca1P56873 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.75□□□□□ -0.53
Sssca1P56873 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Sssca1P56873 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sssca1P56873 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.74□□□□□ -0.53
Sssca1P56873 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.74□□□□□ -0.53
Sssca1P56873 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gm6089-201ENSMUST00000197666 938 ntBASIC11.74□□□□□ -0.53
Sssca1P56873 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Sssca1P56873 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.74□□□□□ -0.53
Sssca1P56873 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sssca1P56873 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sssca1P56873 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.73□□□□□ -0.53
Sssca1P56873 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.73□□□□□ -0.53
Sssca1P56873 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.73□□□□□ -0.53
Sssca1P56873 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sssca1P56873 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms