Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.75□□□□□ -0.05
Sox1P53783 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sox1P53783 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox1P53783 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.74□□□□□ -0.05
Sox1P53783 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox1P53783 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.74□□□□□ -0.05
Sox1P53783 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox1P53783 Gm2383-201ENSMUST00000181461 807 ntBASIC14.74□□□□□ -0.05
Sox1P53783 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox1P53783 Gm37259-201ENSMUST00000193903 849 ntBASIC14.74□□□□□ -0.05
Sox1P53783 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.74□□□□□ -0.05
Sox1P53783 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox1P53783 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox1P53783 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox1P53783 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.74□□□□□ -0.05
Sox1P53783 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sox1P53783 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Sox1P53783 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Gm24514-201ENSMUST00000174961 285 ntBASIC14.73□□□□□ -0.05
Sox1P53783 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox1P53783 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox1P53783 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sox1P53783 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox1P53783 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox1P53783 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox1P53783 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox1P53783 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox1P53783 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox1P53783 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Sox1P53783 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox1P53783 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox1P53783 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox1P53783 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.72□□□□□ -0.05
Sox1P53783 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.72□□□□□ -0.05
Sox1P53783 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.72□□□□□ -0.05
Sox1P53783 Rps4l-202ENSMUST00000204242 789 ntBASIC14.72□□□□□ -0.05
Sox1P53783 Gm6334-201ENSMUST00000207083 228 ntBASIC14.72□□□□□ -0.05
Sox1P53783 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms