Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox18P43680 AC107452.3-201ENSMUST00000228807 1308 ntBASIC13.91□□□□□ -0.18
Sox18P43680 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sox18P43680 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox18P43680 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.91□□□□□ -0.18
Sox18P43680 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox18P43680 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Gm27701-201ENSMUST00000184498 110 ntBASIC13.91□□□□□ -0.18
Sox18P43680 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.91□□□□□ -0.18
Sox18P43680 Gm9257-201ENSMUST00000221254 232 ntBASIC13.91□□□□□ -0.18
Sox18P43680 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox18P43680 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox18P43680 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.9□□□□□ -0.18
Sox18P43680 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Sox18P43680 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.9□□□□□ -0.18
Sox18P43680 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Sox18P43680 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox18P43680 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.9□□□□□ -0.18
Sox18P43680 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox18P43680 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.9□□□□□ -0.18
Sox18P43680 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox18P43680 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox18P43680 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox18P43680 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sox18P43680 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox18P43680 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox18P43680 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox18P43680 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Sox18P43680 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.89□□□□□ -0.19
Sox18P43680 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.89□□□□□ -0.19
Sox18P43680 Gm37720-201ENSMUST00000195497 1241 ntBASIC13.89□□□□□ -0.19
Sox18P43680 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox18P43680 Gm9229-201ENSMUST00000222777 126 ntBASIC13.89□□□□□ -0.19
Sox18P43680 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.89□□□□□ -0.19
Sox18P43680 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Sox18P43680 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms