Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.21□□□□□ -0.45
Mmp9P41245 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Mmp9P41245 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Mmp9P41245 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Mmp9P41245 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Mmp9P41245 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.21□□□□□ -0.46
Mmp9P41245 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Mmp9P41245 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp9P41245 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Mmp9P41245 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Mmp9P41245 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.2□□□□□ -0.46
Mmp9P41245 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Mmp9P41245 Olfr129-201ENSMUST00000122318 993 ntBASIC12.2□□□□□ -0.46
Mmp9P41245 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.2□□□□□ -0.46
Mmp9P41245 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.2□□□□□ -0.46
Mmp9P41245 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.2□□□□□ -0.46
Mmp9P41245 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.2□□□□□ -0.46
Mmp9P41245 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.2□□□□□ -0.46
Mmp9P41245 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Mmp9P41245 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Mmp9P41245 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp9P41245 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.2□□□□□ -0.46
Mmp9P41245 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp9P41245 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.19□□□□□ -0.46
Mmp9P41245 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.19□□□□□ -0.46
Mmp9P41245 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm13312-201ENSMUST00000119631 718 ntBASIC12.19□□□□□ -0.46
Mmp9P41245 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.19□□□□□ -0.46
Mmp9P41245 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.19□□□□□ -0.46
Mmp9P41245 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.19□□□□□ -0.46
Mmp9P41245 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.19□□□□□ -0.46
Mmp9P41245 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Mmp9P41245 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.19□□□□□ -0.46
Mmp9P41245 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Mmp9P41245 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.19□□□□□ -0.46
Mmp9P41245 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp9P41245 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp9P41245 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp9P41245 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mmp9P41245 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms