Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.1□□□□□ -0.47
Abca1P41233 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.1□□□□□ -0.47
Abca1P41233 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.1□□□□□ -0.47
Abca1P41233 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Abca1P41233 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Syt7-205ENSMUST00000224135 1557 ntBASIC12.1□□□□□ -0.47
Abca1P41233 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abca1P41233 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Gm27533-201ENSMUST00000183800 152 ntBASIC12.09□□□□□ -0.47
Abca1P41233 Gm43703-201ENSMUST00000200523 763 ntBASIC12.09□□□□□ -0.47
Abca1P41233 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.09□□□□□ -0.47
Abca1P41233 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Abca1P41233 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Abca1P41233 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Abca1P41233 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Abca1P41233 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Abca1P41233 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.09□□□□□ -0.47
Abca1P41233 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Abca1P41233 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Acot6-202ENSMUST00000222921 3622 ntBASIC12.09□□□□□ -0.47
Abca1P41233 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.09□□□□□ -0.47
Abca1P41233 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Abca1P41233 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Abca1P41233 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.09□□□□□ -0.47
Abca1P41233 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Gm6218-201ENSMUST00000219812 628 ntBASIC12.09□□□□□ -0.47
Abca1P41233 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.09□□□□□ -0.47
Abca1P41233 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.09□□□□□ -0.47
Abca1P41233 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Abca1P41233 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Abca1P41233 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Abca1P41233 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Abca1P41233 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.08□□□□□ -0.48
Abca1P41233 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Gm43433-201ENSMUST00000196573 481 ntBASIC12.08□□□□□ -0.48
Abca1P41233 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.08□□□□□ -0.48
Abca1P41233 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Abca1P41233 Gm14928-201ENSMUST00000120198 477 ntBASIC12.08□□□□□ -0.48
Abca1P41233 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.08□□□□□ -0.48
Abca1P41233 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Abca1P41233 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Abca1P41233 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Abca1P41233 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Abca1P41233 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Abca1P41233 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms