Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm13823-201ENSMUST00000119930 345 ntBASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Rpph1-201ENSMUST00000175096 319 ntBASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Gm10253-201ENSMUST00000194270 940 ntBASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm14127-201ENSMUST00000117906 678 ntBASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm37319-201ENSMUST00000193500 636 ntBASIC11.92□□□□□ -0.5
Tnfrsf9P20334 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm2423-201ENSMUST00000074863 733 ntBASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tnfrsf9P20334 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.91□□□□□ -0.5
Tnfrsf9P20334 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms