Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.78■□□□□ 0.28
Usp53P15975 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Gm15487-201ENSMUST00000122373 465 ntBASIC16.78■□□□□ 0.28
Usp53P15975 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp53P15975 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp53P15975 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.78■□□□□ 0.28
Usp53P15975 Gm45453-201ENSMUST00000211758 853 ntBASIC16.78■□□□□ 0.28
Usp53P15975 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.78■□□□□ 0.28
Usp53P15975 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.78■□□□□ 0.28
Usp53P15975 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Usp53P15975 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Usp53P15975 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp53P15975 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
Usp53P15975 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp53P15975 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Usp53P15975 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Usp53P15975 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp53P15975 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp53P15975 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp53P15975 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.77■□□□□ 0.28
Usp53P15975 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Usp53P15975 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp53P15975 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp53P15975 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp53P15975 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Usp53P15975 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp53P15975 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Usp53P15975 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Usp53P15975 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.76■□□□□ 0.27
Usp53P15975 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.76■□□□□ 0.27
Usp53P15975 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Usp53P15975 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Usp53P15975 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp53P15975 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp53P15975 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Usp53P15975 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.75■□□□□ 0.27
Usp53P15975 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp53P15975 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.75■□□□□ 0.27
Usp53P15975 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.75■□□□□ 0.27
Usp53P15975 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.75■□□□□ 0.27
Usp53P15975 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.75■□□□□ 0.27
Usp53P15975 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.75■□□□□ 0.27
Usp53P15975 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms