Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl1P10146 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccl1P10146 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccl1P10146 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.26□□□□□ -0.61
Ccl1P10146 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccl1P10146 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccl1P10146 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.26□□□□□ -0.61
Ccl1P10146 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.26□□□□□ -0.61
Ccl1P10146 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ccl1P10146 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccl1P10146 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl1P10146 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.25□□□□□ -0.61
Ccl1P10146 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.25□□□□□ -0.61
Ccl1P10146 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccl1P10146 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccl1P10146 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ccl1P10146 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccl1P10146 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ccl1P10146 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccl1P10146 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl1P10146 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccl1P10146 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Gm10499-201ENSMUST00000174094 934 ntBASIC11.24□□□□□ -0.61
Ccl1P10146 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccl1P10146 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms