Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
PtcraP0C6B2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PtcraP0C6B2 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.61□□□□□ -0.39
PtcraP0C6B2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.6□□□□□ -0.39
PtcraP0C6B2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PtcraP0C6B2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Gm13365-201ENSMUST00000121188 973 ntBASIC12.59□□□□□ -0.39
PtcraP0C6B2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Mir6990-201ENSMUST00000183724 91 ntBASIC12.59□□□□□ -0.39
PtcraP0C6B2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.59□□□□□ -0.39
PtcraP0C6B2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PtcraP0C6B2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PtcraP0C6B2 Gm11594-201ENSMUST00000122313 162 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms