Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxa4P06798 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxa4P06798 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.26□□□□□ -0.13
Hoxa4P06798 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Hoxa4P06798 Gm8410-201ENSMUST00000117225 605 ntBASIC14.26□□□□□ -0.13
Hoxa4P06798 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxa4P06798 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.26□□□□□ -0.13
Hoxa4P06798 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hoxa4P06798 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxa4P06798 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxa4P06798 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.26□□□□□ -0.13
Hoxa4P06798 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.26□□□□□ -0.13
Hoxa4P06798 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hoxa4P06798 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.25□□□□□ -0.13
Hoxa4P06798 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm15957-201ENSMUST00000118893 974 ntBASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm12428-201ENSMUST00000119844 727 ntBASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm44608-201ENSMUST00000206827 855 ntBASIC14.25□□□□□ -0.13
Hoxa4P06798 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxa4P06798 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.25□□□□□ -0.13
Hoxa4P06798 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxa4P06798 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxa4P06798 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Gm27306-201ENSMUST00000183970 107 ntBASIC14.24□□□□□ -0.13
Hoxa4P06798 Gm27680-201ENSMUST00000184192 160 ntBASIC14.24□□□□□ -0.13
Hoxa4P06798 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.24□□□□□ -0.13
Hoxa4P06798 Dupd1-202ENSMUST00000224735 548 ntBASIC14.24□□□□□ -0.13
Hoxa4P06798 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.24□□□□□ -0.13
Hoxa4P06798 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxa4P06798 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.23□□□□□ -0.13
Hoxa4P06798 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms