Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.94□□□□□ -0.34
P06344 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Gm13015-201ENSMUST00000118674 204 ntBASIC12.94□□□□□ -0.34
P06344 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.94□□□□□ -0.34
P06344 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.94□□□□□ -0.34
P06344 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Gm27430-201ENSMUST00000184585 107 ntBASIC12.94□□□□□ -0.34
P06344 Gm10576-201ENSMUST00000191927 825 ntBASIC12.94□□□□□ -0.34
P06344 Gm44333-201ENSMUST00000197168 107 ntBASIC12.94□□□□□ -0.34
P06344 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Gm45098-201ENSMUST00000207179 657 ntBASIC12.94□□□□□ -0.34
P06344 Gm18049-201ENSMUST00000208909 581 ntBASIC12.94□□□□□ -0.34
P06344 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.94□□□□□ -0.34
P06344 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06344 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.94□□□□□ -0.34
P06344 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.94□□□□□ -0.34
P06344 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P06344 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P06344 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 AA543401-201ENSMUST00000164248 1269 ntBASIC12.93□□□□□ -0.34
P06344 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Auts2-212ENSMUST00000178555 309 ntBASIC12.93□□□□□ -0.34
P06344 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.93□□□□□ -0.34
P06344 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
P06344 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.93□□□□□ -0.34
P06344 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06344 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P06344 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.92□□□□□ -0.34
P06344 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
P06344 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.92□□□□□ -0.34
P06344 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
P06344 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
P06344 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P06344 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.92□□□□□ -0.34
P06344 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.92□□□□□ -0.34
P06344 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.92□□□□□ -0.34
P06344 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P06344 Gm9726-201ENSMUST00000180321 678 ntBASIC12.92□□□□□ -0.34
P06344 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.92□□□□□ -0.34
P06344 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.92□□□□□ -0.34
P06344 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.92□□□□□ -0.34
P06344 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.92□□□□□ -0.34
P06344 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.92□□□□□ -0.34
P06344 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P06344 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms