Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm24158-201ENSMUST00000175263 71 ntBASIC12.19□□□□□ -0.46
Hoxa3P02831 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Gm27920-201ENSMUST00000183953 96 ntBASIC12.19□□□□□ -0.46
Hoxa3P02831 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.19□□□□□ -0.46
Hoxa3P02831 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.19□□□□□ -0.46
Hoxa3P02831 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Gm11543-201ENSMUST00000120758 370 ntBASIC12.18□□□□□ -0.46
Hoxa3P02831 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hoxa3P02831 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.18□□□□□ -0.46
Hoxa3P02831 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.18□□□□□ -0.46
Hoxa3P02831 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.18□□□□□ -0.46
Hoxa3P02831 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxa3P02831 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxa3P02831 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hoxa3P02831 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.17□□□□□ -0.46
Hoxa3P02831 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Gm20949-201ENSMUST00000206478 952 ntBASIC12.17□□□□□ -0.46
Hoxa3P02831 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.17□□□□□ -0.46
Hoxa3P02831 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa3P02831 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa3P02831 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa3P02831 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa3P02831 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms