Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Gm13392-201ENSMUST00000117708 150 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Gm12957-201ENSMUST00000117835 377 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Gm15824-201ENSMUST00000119516 955 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.55■□□□□ 0.4
Col4a1P02463 Gm15429-201ENSMUST00000151268 798 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.55■□□□□ 0.4
Col4a1P02463 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a1P02463 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Col4a1P02463 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col4a1P02463 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.54■□□□□ 0.4
Col4a1P02463 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.54■□□□□ 0.4
Col4a1P02463 Gm8062-201ENSMUST00000139696 444 ntBASIC17.54■□□□□ 0.4
Col4a1P02463 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Gm5425-201ENSMUST00000214125 459 ntBASIC17.54■□□□□ 0.4
Col4a1P02463 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col4a1P02463 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.54■□□□□ 0.4
Col4a1P02463 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a1P02463 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col4a1P02463 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.53■□□□□ 0.4
Col4a1P02463 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.53■□□□□ 0.4
Col4a1P02463 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.53■□□□□ 0.4
Col4a1P02463 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.53■□□□□ 0.4
Col4a1P02463 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.53■□□□□ 0.4
Col4a1P02463 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Col4a1P02463 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.53■□□□□ 0.4
Col4a1P02463 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.53■□□□□ 0.4
Col4a1P02463 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a1P02463 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col4a1P02463 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.52■□□□□ 0.4
Col4a1P02463 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col4a1P02463 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Gm14660-201ENSMUST00000119809 575 ntBASIC17.52■□□□□ 0.4
Col4a1P02463 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Col4a1P02463 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.52■□□□□ 0.4
Col4a1P02463 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col4a1P02463 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col4a1P02463 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col4a1P02463 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Col4a1P02463 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a1P02463 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.52■□□□□ 0.4
Col4a1P02463 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.52■□□□□ 0.4
Col4a1P02463 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a1P02463 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a1P02463 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a1P02463 Gm11803-201ENSMUST00000119966 444 ntBASIC17.52■□□□□ 0.39
Col4a1P02463 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.52■□□□□ 0.39
Col4a1P02463 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.52■□□□□ 0.39
Col4a1P02463 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a1P02463 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Col4a1P02463 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a1P02463 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a1P02463 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms