Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.22□□□□□ -0.77
Hbb-b1P02088 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hbb-b1P02088 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.22□□□□□ -0.77
Hbb-b1P02088 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Gm18284-201ENSMUST00000172604 624 ntBASIC10.21□□□□□ -0.77
Hbb-b1P02088 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.21□□□□□ -0.77
Hbb-b1P02088 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.21□□□□□ -0.77
Hbb-b1P02088 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hbb-b1P02088 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.21□□□□□ -0.78
Hbb-b1P02088 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hbb-b1P02088 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.2□□□□□ -0.78
Hbb-b1P02088 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.2□□□□□ -0.78
Hbb-b1P02088 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Hbb-b1P02088 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.19□□□□□ -0.78
Hbb-b1P02088 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hbb-b1P02088 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms