Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.61□□□□□ -0.71
TcraP01849 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.61□□□□□ -0.71
TcraP01849 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.61□□□□□ -0.71
TcraP01849 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.61□□□□□ -0.71
TcraP01849 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.61□□□□□ -0.71
TcraP01849 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.61□□□□□ -0.71
TcraP01849 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
TcraP01849 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.61□□□□□ -0.71
TcraP01849 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
TcraP01849 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
TcraP01849 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TcraP01849 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.6□□□□□ -0.71
TcraP01849 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.6□□□□□ -0.71
TcraP01849 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.6□□□□□ -0.71
TcraP01849 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
TcraP01849 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TcraP01849 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Celf4-206ENSMUST00000224553 1729 ntBASIC10.59□□□□□ -0.71
TcraP01849 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
TcraP01849 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
TcraP01849 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
TcraP01849 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
TcraP01849 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.59□□□□□ -0.71
TcraP01849 Gm6345-202ENSMUST00000180900 204 ntBASIC10.59□□□□□ -0.71
TcraP01849 Gm29518-201ENSMUST00000190858 372 ntBASIC10.59□□□□□ -0.71
TcraP01849 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
TcraP01849 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.59□□□□□ -0.71
TcraP01849 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.59□□□□□ -0.71
TcraP01849 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms