Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Vti1aO89116 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Vti1aO89116 Gm43767-201ENSMUST00000198933 381 ntBASIC15.65■□□□□ 0.1
Vti1aO89116 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.65■□□□□ 0.1
Vti1aO89116 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vti1aO89116 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.65■□□□□ 0.1
Vti1aO89116 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.65■□□□□ 0.1
Vti1aO89116 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1aO89116 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Efs-202ENSMUST00000227037 2540 ntBASIC15.64■□□□□ 0.09
Vti1aO89116 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.64■□□□□ 0.09
Vti1aO89116 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.64■□□□□ 0.09
Vti1aO89116 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vti1aO89116 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Vti1aO89116 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vti1aO89116 Gm13015-201ENSMUST00000118674 204 ntBASIC15.64■□□□□ 0.09
Vti1aO89116 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vti1aO89116 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.64■□□□□ 0.09
Vti1aO89116 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.64■□□□□ 0.09
Vti1aO89116 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.64■□□□□ 0.09
Vti1aO89116 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vti1aO89116 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vti1aO89116 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.64■□□□□ 0.09
Vti1aO89116 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1aO89116 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.63■□□□□ 0.09
Vti1aO89116 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vti1aO89116 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.63■□□□□ 0.09
Vti1aO89116 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.63■□□□□ 0.09
Vti1aO89116 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Vti1aO89116 Gm25144-201ENSMUST00000179561 110 ntBASIC15.63■□□□□ 0.09
Vti1aO89116 Gm25352-201ENSMUST00000179815 110 ntBASIC15.63■□□□□ 0.09
Vti1aO89116 Mir7684-201ENSMUST00000183858 60 ntBASIC15.63■□□□□ 0.09
Vti1aO89116 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.63■□□□□ 0.09
Vti1aO89116 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Gm2423-201ENSMUST00000074863 733 ntBASIC15.63■□□□□ 0.09
Vti1aO89116 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.63■□□□□ 0.09
Vti1aO89116 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.63■□□□□ 0.09
Vti1aO89116 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Vti1aO89116 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.63■□□□□ 0.09
Vti1aO89116 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vti1aO89116 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1aO89116 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
Vti1aO89116 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.62■□□□□ 0.09
Vti1aO89116 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vti1aO89116 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms