Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Thap2-203ENSMUST00000218989 527 ntBASIC13.92□□□□□ -0.18
Hcn1O88704 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.92□□□□□ -0.18
Hcn1O88704 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hcn1O88704 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Hcn1O88704 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn1O88704 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hcn1O88704 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.91□□□□□ -0.18
Hcn1O88704 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Gm17271-201ENSMUST00000165535 355 ntBASIC13.91□□□□□ -0.18
Hcn1O88704 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Gm45747-201ENSMUST00000212203 999 ntBASIC13.91□□□□□ -0.18
Hcn1O88704 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hcn1O88704 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hcn1O88704 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hcn1O88704 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.91□□□□□ -0.18
Hcn1O88704 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.91□□□□□ -0.18
Hcn1O88704 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn1O88704 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Hcn1O88704 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Hcn1O88704 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.9□□□□□ -0.18
Hcn1O88704 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.9□□□□□ -0.18
Hcn1O88704 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hcn1O88704 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.9□□□□□ -0.18
Hcn1O88704 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hcn1O88704 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Hcn1O88704 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hcn1O88704 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hcn1O88704 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Hcn1O88704 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hcn1O88704 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Hcn1O88704 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms