Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Slc6a20bO88575 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Gm8652-201ENSMUST00000181363 964 ntBASIC15.74■□□□□ 0.11
Slc6a20bO88575 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a20bO88575 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.73■□□□□ 0.11
Slc6a20bO88575 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.73■□□□□ 0.11
Slc6a20bO88575 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Gm8463-201ENSMUST00000208573 613 ntBASIC15.73■□□□□ 0.11
Slc6a20bO88575 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.73■□□□□ 0.11
Slc6a20bO88575 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.73■□□□□ 0.11
Slc6a20bO88575 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a20bO88575 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Gm11814-201ENSMUST00000119515 929 ntBASIC15.72■□□□□ 0.11
Slc6a20bO88575 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.72■□□□□ 0.11
Slc6a20bO88575 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Gm43179-201ENSMUST00000198797 275 ntBASIC15.72■□□□□ 0.11
Slc6a20bO88575 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a20bO88575 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm10275-202ENSMUST00000168697 495 ntBASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.71■□□□□ 0.11
Slc6a20bO88575 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm10275-201ENSMUST00000092620 635 ntBASIC15.71■□□□□ 0.11
Slc6a20bO88575 Gm6091-201ENSMUST00000098307 165 ntBASIC15.71■□□□□ 0.11
Slc6a20bO88575 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.71■□□□□ 0.11
Slc6a20bO88575 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a20bO88575 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.71■□□□□ 0.11
Slc6a20bO88575 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms