Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Gm23935-201ENSMUST00000102303 57 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Gm24270-201ENSMUST00000102326 57 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Gm24245-201ENSMUST00000157318 57 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Chchd1-203ENSMUST00000224633 557 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.62□□□□□ -0.07
Dnmt3aO88508 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Dnmt3aO88508 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm13365-201ENSMUST00000121188 973 ntBASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm18057-201ENSMUST00000208220 503 ntBASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Gm5867-201ENSMUST00000063197 592 ntBASIC14.61□□□□□ -0.07
Dnmt3aO88508 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.61□□□□□ -0.07
Dnmt3aO88508 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Dnmt3aO88508 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Gm13464-201ENSMUST00000119418 935 ntBASIC14.6□□□□□ -0.07
Dnmt3aO88508 Gm11543-201ENSMUST00000120758 370 ntBASIC14.6□□□□□ -0.07
Dnmt3aO88508 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.6□□□□□ -0.07
Dnmt3aO88508 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dnmt3aO88508 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms