Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ttc3O88196 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ttc3O88196 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.11■□□□□ 0.01
Ttc3O88196 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.11■□□□□ 0.01
Ttc3O88196 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ttc3O88196 Gm8515-201ENSMUST00000194852 576 ntBASIC15.11■□□□□ 0.01
Ttc3O88196 Gm18027-201ENSMUST00000218947 619 ntBASIC15.11■□□□□ 0.01
Ttc3O88196 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.11■□□□□ 0.01
Ttc3O88196 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ttc3O88196 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ttc3O88196 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ttc3O88196 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ttc3O88196 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ttc3O88196 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.1■□□□□ 0.01
Ttc3O88196 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ttc3O88196 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.1■□□□□ 0.01
Ttc3O88196 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.1■□□□□ 0.01
Ttc3O88196 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.1■□□□□ 0.01
Ttc3O88196 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Gm6180-201ENSMUST00000065243 498 ntBASIC15.1■□□□□ 0.01
Ttc3O88196 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.1■□□□□ 0.01
Ttc3O88196 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ttc3O88196 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ttc3O88196 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ttc3O88196 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Ttc3O88196 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.1■□□□□ 0.01
Ttc3O88196 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ttc3O88196 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Ttc3O88196 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.09■□□□□ 0.01
Ttc3O88196 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Gm15460-201ENSMUST00000118147 391 ntBASIC15.09■□□□□ 0.01
Ttc3O88196 Gm12882-201ENSMUST00000121696 517 ntBASIC15.09■□□□□ 0.01
Ttc3O88196 Gm23984-201ENSMUST00000157139 203 ntBASIC15.09■□□□□ 0.01
Ttc3O88196 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.09■□□□□ 0.01
Ttc3O88196 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.09■□□□□ 0.01
Ttc3O88196 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.09■□□□□ 0.01
Ttc3O88196 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ttc3O88196 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.09■□□□□ 0.01
Ttc3O88196 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.09■□□□□ 0.01
Ttc3O88196 Gm15678-201ENSMUST00000117573 960 ntBASIC15.09■□□□□ 0.01
Ttc3O88196 Gm15393-201ENSMUST00000120499 219 ntBASIC15.09■□□□□ 0.01
Ttc3O88196 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.09■□□□□ 0.01
Ttc3O88196 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ttc3O88196 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ttc3O88196 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ttc3O88196 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ttc3O88196 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ttc3O88196 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.08■□□□□ 0.01
Ttc3O88196 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ttc3O88196 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ttc3O88196 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ttc3O88196 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.08■□□□□ 0
Ttc3O88196 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ttc3O88196 Gm44608-201ENSMUST00000206827 855 ntBASIC15.08■□□□□ 0
Ttc3O88196 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ttc3O88196 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ttc3O88196 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms