Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Mmp8O70138 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.68■□□□□ 0.42
Mmp8O70138 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Gm5566-201ENSMUST00000116118 459 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Gm6415-201ENSMUST00000118488 348 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.68■□□□□ 0.42
Mmp8O70138 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.68■□□□□ 0.42
Mmp8O70138 Gm28630-201ENSMUST00000187806 498 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Mmp8O70138 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Mmp8O70138 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.68■□□□□ 0.42
Mmp8O70138 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp8O70138 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Mmp8O70138 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.67■□□□□ 0.42
Mmp8O70138 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Mmp8O70138 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.67■□□□□ 0.42
Mmp8O70138 Gm9719-201ENSMUST00000162765 543 ntBASIC17.67■□□□□ 0.42
Mmp8O70138 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.67■□□□□ 0.42
Mmp8O70138 Gm27631-201ENSMUST00000184163 466 ntBASIC17.67■□□□□ 0.42
Mmp8O70138 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.67■□□□□ 0.42
Mmp8O70138 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.67■□□□□ 0.42
Mmp8O70138 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp8O70138 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp8O70138 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Mmp8O70138 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Mmp8O70138 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.66■□□□□ 0.42
Mmp8O70138 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.66■□□□□ 0.42
Mmp8O70138 Gm12882-201ENSMUST00000121696 517 ntBASIC17.66■□□□□ 0.42
Mmp8O70138 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.66■□□□□ 0.42
Mmp8O70138 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Mmp8O70138 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp8O70138 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms