Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.44□□□□□ -0.1
Ldb2O55203 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.44□□□□□ -0.1
Ldb2O55203 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ldb2O55203 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ldb2O55203 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.43□□□□□ -0.1
Ldb2O55203 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Gm18889-201ENSMUST00000174284 929 ntBASIC14.43□□□□□ -0.1
Ldb2O55203 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ldb2O55203 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.43□□□□□ -0.1
Ldb2O55203 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ldb2O55203 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb2O55203 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ldb2O55203 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.42□□□□□ -0.1
Ldb2O55203 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.42□□□□□ -0.1
Ldb2O55203 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb2O55203 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.42□□□□□ -0.1
Ldb2O55203 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb2O55203 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb2O55203 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.42□□□□□ -0.1
Ldb2O55203 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.42□□□□□ -0.1
Ldb2O55203 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ldb2O55203 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Ldb2O55203 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb2O55203 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb2O55203 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ldb2O55203 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.41□□□□□ -0.1
Ldb2O55203 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ldb2O55203 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Gm10275-202ENSMUST00000168697 495 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms