Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.45□□□□□ -0.58
Pde6dO55057 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.45□□□□□ -0.58
Pde6dO55057 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pde6dO55057 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.45□□□□□ -0.58
Pde6dO55057 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pde6dO55057 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.45□□□□□ -0.58
Pde6dO55057 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pde6dO55057 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Gm13312-201ENSMUST00000119631 718 ntBASIC11.44□□□□□ -0.58
Pde6dO55057 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.44□□□□□ -0.58
Pde6dO55057 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Pde6dO55057 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pde6dO55057 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Pde6dO55057 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Pde6dO55057 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.43□□□□□ -0.58
Pde6dO55057 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pde6dO55057 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.43□□□□□ -0.58
Pde6dO55057 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.43□□□□□ -0.58
Pde6dO55057 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Pde6dO55057 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.43□□□□□ -0.58
Pde6dO55057 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.43□□□□□ -0.58
Pde6dO55057 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Pde6dO55057 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.43□□□□□ -0.58
Pde6dO55057 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pde6dO55057 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.43□□□□□ -0.58
Pde6dO55057 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pde6dO55057 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.42□□□□□ -0.58
Pde6dO55057 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms