Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Dkk1O54908 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm14606-201ENSMUST00000117078 1155 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Gm14358-201ENSMUST00000118458 403 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Gm1401-201ENSMUST00000122048 772 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC13.09□□□□□ -0.31
Dkk1O54908 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm26914-201ENSMUST00000182262 223 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Gm27300-201ENSMUST00000184085 97 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Gm27335-201ENSMUST00000184758 97 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm9517-201ENSMUST00000195021 874 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Gm8952-201ENSMUST00000206828 1102 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.09□□□□□ -0.31
Dkk1O54908 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC13.09□□□□□ -0.31
Dkk1O54908 AC116589.3-202ENSMUST00000221770 649 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 AC116589.6-201ENSMUST00000222252 649 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Psmb5-202ENSMUST00000227257 622 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 AC170810.2-201ENSMUST00000228384 1232 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Dkk1O54908 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Dkk1O54908 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.09□□□□□ -0.31
Dkk1O54908 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Gm37082-201ENSMUST00000192629 1927 ntBASIC13.09□□□□□ -0.31
Dkk1O54908 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.09□□□□□ -0.31
Dkk1O54908 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Dkk1O54908 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.08□□□□□ -0.31
Dkk1O54908 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Dkk1O54908 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Dkk1O54908 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Dkk1O54908 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Dkk1O54908 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.08□□□□□ -0.31
Dkk1O54908 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC13.08□□□□□ -0.31
Dkk1O54908 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Dkk1O54908 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Dkk1O54908 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Gm12583-201ENSMUST00000120677 853 ntBASIC13.08□□□□□ -0.32
Dkk1O54908 Gm11896-201ENSMUST00000121105 820 ntBASIC13.08□□□□□ -0.32
Dkk1O54908 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC13.08□□□□□ -0.32
Dkk1O54908 Gm14413-201ENSMUST00000122158 408 ntBASIC13.08□□□□□ -0.32
Dkk1O54908 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.08□□□□□ -0.32
Dkk1O54908 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.08□□□□□ -0.32
Dkk1O54908 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.08□□□□□ -0.32
Dkk1O54908 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC13.08□□□□□ -0.32
Dkk1O54908 Gm44771-201ENSMUST00000206975 626 ntBASIC13.08□□□□□ -0.32
Dkk1O54908 Gm45733-201ENSMUST00000212988 437 ntBASIC13.08□□□□□ -0.32
Dkk1O54908 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.08□□□□□ -0.32
Dkk1O54908 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Dkk1O54908 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Olfr700-202ENSMUST00000214840 1505 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Dkk1O54908 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms