Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Matn3O35701 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Matn3O35701 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Matn3O35701 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.2□□□□□ -0.3
Matn3O35701 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Matn3O35701 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Matn3O35701 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Matn3O35701 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Matn3O35701 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Matn3O35701 Gm8344-201ENSMUST00000119813 856 ntBASIC13.2□□□□□ -0.3
Matn3O35701 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.2□□□□□ -0.3
Matn3O35701 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Matn3O35701 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.2□□□□□ -0.3
Matn3O35701 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Matn3O35701 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Matn3O35701 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Matn3O35701 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Matn3O35701 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.19□□□□□ -0.3
Matn3O35701 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.19□□□□□ -0.3
Matn3O35701 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Gm18622-201ENSMUST00000219361 595 ntBASIC13.19□□□□□ -0.3
Matn3O35701 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Matn3O35701 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Matn3O35701 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.18□□□□□ -0.3
Matn3O35701 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Matn3O35701 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Matn3O35701 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms