Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim55G3X8Y1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Paupar-201ENSMUST00000194826 3482 ntBASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim55G3X8Y1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim55G3X8Y1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms