Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Gm10275-201ENSMUST00000092620 635 ntBASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh11xF6ZNL5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh11xF6ZNL5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh11xF6ZNL5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh11xF6ZNL5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh11xF6ZNL5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh11xF6ZNL5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdh11xF6ZNL5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh11xF6ZNL5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Gm11543-201ENSMUST00000120758 370 ntBASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Gm37171-201ENSMUST00000192636 1185 ntBASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh11xF6ZNL5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Rprl2-201ENSMUST00000157150 290 ntBASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh11xF6ZNL5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms