Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm27682-201ENSMUST00000183930 110 ntBASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm21769-201ENSMUST00000211922 111 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm13689-201ENSMUST00000119360 685 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm9083-201ENSMUST00000120423 819 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.63□□□□□ -0.55
Chd6A3KFM7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm19439-201ENSMUST00000198195 2273 ntBASIC11.62□□□□□ -0.55
Chd6A3KFM7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm23200-201ENSMUST00000104379 132 ntBASIC11.62□□□□□ -0.55
Chd6A3KFM7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm14028-201ENSMUST00000117434 479 ntBASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm11331-201ENSMUST00000119764 288 ntBASIC11.62□□□□□ -0.55
Chd6A3KFM7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Gm17795-201ENSMUST00000214505 757 ntBASIC11.62□□□□□ -0.55
Chd6A3KFM7 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.62□□□□□ -0.55
Chd6A3KFM7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd6A3KFM7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms