Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a4A2AX52 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Gm27701-201ENSMUST00000184498 110 ntBASIC12.22□□□□□ -0.45
Col6a4A2AX52 Gm33320-201ENSMUST00000192232 530 ntBASIC12.22□□□□□ -0.45
Col6a4A2AX52 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.22□□□□□ -0.45
Col6a4A2AX52 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a4A2AX52 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a4A2AX52 AA619741-201ENSMUST00000195095 646 ntBASIC12.21□□□□□ -0.45
Col6a4A2AX52 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a4A2AX52 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.21□□□□□ -0.45
Col6a4A2AX52 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Gm12957-201ENSMUST00000117835 377 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Gm12390-201ENSMUST00000117897 397 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Gm45331-201ENSMUST00000209868 554 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Gm46209-201ENSMUST00000217912 553 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Mir125a-201ENSMUST00000083545 68 ntBASIC12.21□□□□□ -0.46
Col6a4A2AX52 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Col6a4A2AX52 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms