Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Olfr286-202ENSMUST00000205305 969 ntBASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Mir7071-201ENSMUST00000184847 69 ntBASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12d-1A0N8R0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms