Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Mir3113-201ENSMUST00000175478 76 ntBASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lcmt1A0A0U1RNF2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lcmt1A0A0U1RNF2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lcmt1A0A0U1RNF2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lcmt1A0A0U1RNF2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Lcmt1A0A0U1RNF2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Gm12260-201ENSMUST00000122447 411 ntBASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Gm45747-201ENSMUST00000212203 999 ntBASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lcmt1A0A0U1RNF2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 Gm9726-201ENSMUST00000180321 678 ntBASIC16.13■□□□□ 0.17
Lcmt1A0A0U1RNF2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms