Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm37153-201ENSMUST00000193637 231 ntBASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Olfr286-202ENSMUST00000205305 969 ntBASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6d-5A0A075B6B9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6d-5A0A075B6B9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm23634-201ENSMUST00000175071 91 ntBASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm18041-201ENSMUST00000218210 618 ntBASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.7□□□□□ -0.54
Trav6d-5A0A075B6B9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms