Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Gm8749-201ENSMUST00000117737 331 ntBASIC11.91□□□□□ -0.5
Trav18A0A075B656 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.91□□□□□ -0.5
Trav18A0A075B656 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.9□□□□□ -0.5
Trav18A0A075B656 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Mir5131-201ENSMUST00000175426 93 ntBASIC11.9□□□□□ -0.5
Trav18A0A075B656 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Gm27628-201ENSMUST00000184911 107 ntBASIC11.9□□□□□ -0.5
Trav18A0A075B656 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.9□□□□□ -0.5
Trav18A0A075B656 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.9□□□□□ -0.5
Trav18A0A075B656 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav18A0A075B656 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav18A0A075B656 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm13597-201ENSMUST00000121239 375 ntBASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.89□□□□□ -0.51
Trav18A0A075B656 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm28659-201ENSMUST00000188013 759 ntBASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm2451-201ENSMUST00000199447 999 ntBASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm10290-201ENSMUST00000200451 999 ntBASIC11.89□□□□□ -0.51
Trav18A0A075B656 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.89□□□□□ -0.51
Trav18A0A075B656 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms