Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav5-4A0A075B652 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.16□□□□□ -0.46
Trav5-4A0A075B652 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Mir5126-201ENSMUST00000175513 77 ntBASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Gm27628-201ENSMUST00000184911 107 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms