Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac6Q9Z2V5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac6Q9Z2V5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.08■□□□□ 0.49
Hdac6Q9Z2V5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac6Q9Z2V5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Gm12957-201ENSMUST00000117835 377 ntBASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Hdac6Q9Z2V5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac6Q9Z2V5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Gm45841-201ENSMUST00000207700 164 ntBASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac6Q9Z2V5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Gm8463-201ENSMUST00000208573 613 ntBASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac6Q9Z2V5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms