Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1bQ9Z2C6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Gm8749-201ENSMUST00000117737 331 ntBASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Gm27357-201ENSMUST00000183754 135 ntBASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk1bQ9Z2C6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gm37153-201ENSMUST00000193637 231 ntBASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk1bQ9Z2C6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Gm4535-201ENSMUST00000182274 558 ntBASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Gm10355-201ENSMUST00000097146 517 ntBASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk1bQ9Z2C6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms