Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpne6Q9Z140 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Gm8410-201ENSMUST00000117225 605 ntBASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cpne6Q9Z140 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Cpne6Q9Z140 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne6Q9Z140 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne6Q9Z140 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne6Q9Z140 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.13□□□□□ -0.15
Cpne6Q9Z140 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms